BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F01LP1|AL426234
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig859 1619 0.0
>3x_Contig859
Length = 2084
Score = 1619 bits (816), Expect = 0.0
Identities = 817/818 (99%)
Strand = Plus / Plus
Query: 1 gatccgtttttgggactaactgaaaaacttttcttgaacaatgaagttactcagaaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gatccgtttttgggactaactgaaaaacttttcttgaacaatgaagttactcagaaagct 476
Query: 61 gccactcctgcagcacctagtctcacaccatctgctccaggggcatctgttgcggggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gccactcctgcagcacctagtctcacaccatctgctccaggggcatctgttgcggggtct 536
Query: 121 tcaacacctggtgctgatgctgtaaagacagaaactcctgacactacggcaaacacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcaacacctggtgctgatgctgtaaagacagaaactcctgacactacggcaaacacacca 596
Query: 181 atcgtgacggcgtcttctgaaaacactaataagaaaacagtgaagaaagctcccggtgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atcgtgacggcgtcttctgaaaacactaataagaaaacagtgaagaaagctcccggtgct 656
Query: 241 gtgcatctcggtagaagagtcgattacttattcactgtcctaagagacgaagctaagggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gtgcatctcggtagaagagtcgattacttattcactgtcctaagagacgaagctaagggt 716
Query: 301 ccccaaactgatccatctcaccctgccggctcttcktcaaccggaaccacgacgcctcag 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 717 ccccaaactgatccatctcaccctgccggctcttcgtcaaccggaaccacgacgcctcag 776
Query: 361 caaaacaaacgtaaaccaaagaagtctgctactactgctgggaacagcaatgggaacgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 caaaacaaacgtaaaccaaagaagtctgctactactgctgggaacagcaatgggaacgaa 836
Query: 421 aatgcccataccgctggtaccccaagtgacggcaatagtgttaacttaaccggcaaggac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 aatgcccataccgctggtaccccaagtgacggcaatagtgttaacttaaccggcaaggac 896
Query: 481 tctacaccagacaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tctacaccagacaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaacca 956
Query: 541 tcatcaagatctggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 tcatcaagatctggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagac 1016
Query: 601 ataccgttggcaccaaaagccgatatccgtcttcctgacaaagaatacgacagtatggac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 ataccgttggcaccaaaagccgatatccgtcttcctgacaaagaatacgacagtatggac 1076
Query: 661 gaagaagagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 gaagaagagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatct 1136
Query: 721 ggaggagacggtcttgaacgtaagcaatgggctaacctattgaagaaggaattgaaacgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 ggaggagacggtcttgaacgtaagcaatgggctaacctattgaagaaggaattgaaacgt 1196
Query: 781 gttggtgactacatcgaatcgcacaagaaggactcgtc 818
||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gttggtgactacatcgaatcgcacaagaaggactcgtc 1234
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4771
Number of Sequences: 1807
Number of extensions: 4771
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)